Publications

2026

Medical facemask waste alters detritus decomposition and fungal communities in a freshwater pond.
Kong, Z.H.; Stangl, M.; Oester, R.; Rehnstam, S.; Futter, M.;Siddique, AB; Bundschuh, M.; Mckie, B. Scientific Reports, 2026. Research Article (Peer Reviewed) (Article)

2025

Airborne eDNA captures three decades of ecosystem biodiversity.
Sullivan, AR; Karlsson, E; Svensson, D; Brindefalk, B; Villegas, JA; Mikko, A; Bellieny, D; Siddique, AB; ... et al. Nat Commun, 2025. Research Article (Peer Reviewed) (Article)

Transcriptomic responses of beet to infection by beet mild yellowing virus.
Puthanveed V†, Sajeevan RS, Siddique AB, Alexandersson E, Joshi P, Snell P, Lennefors BL, & Kvarnheden A*. BMC Plant Biol, 2025. Research Article (Peer Reviewed) (Article, PDF)

Rapid Shifts in Bryophyte Phenology Revealed by Airborne eDNA.
Bengtsson F, Cronberg N, Lozano Villegas JA, Siddique AB, Stenberg P, Ekroos J.
bioRxiv, 2025. Research Article (Peer Reviewed) (Article, PDF)

2024

B Chromosomes in Wheat: Evolution, Functions and Breeding Potential.
Islam MM, Deepo DM, Siddique AB, Nasif SO, Zonayet M, Hassan O.
Agronomy, 2024. Research Article (Peer Reviewed) (Article, PDF)

2023

Prospects of Endophytic Fungi as a Natural Resource for the Sustainability of Crop Production in the Modern Era of Changing Climate.
Nasif SO, Siddique AB, Islam M, Hassan O, Deepo DM.
Symbiosis, 2023. Research Article (Peer Reviewed) (Article, PDF)

Milder Autumns May Increase Risk for Infection of Crops with Turnip Yellows Virus.
Puthanveed V, Singh K, Poimenopoulou E, Pettersson J, Siddique AB.
Phytopathology, 2023. Research Article (Peer Reviewed) (Article, PDF)

2022

Cytogenetics and Consequences of Polyploidization on Different Biotic–Abiotic Stress Tolerance and the Potential Mechanisms Involved.
Islam MM, Siddique AB, et al.
Plants, 2022. Review Article (Peer Reviewed) (Article, PDF)

Optimization of Protocol for Construction of Fungal ITS Amplicon Library for High-Throughput Illumina Sequencing to Study the Mycobiome of Aspen Leaves.
Siddique AB, Albrectsen BR, Ilbi H.
Applied Sciences, 2022. Research Article (Peer Reviewed) (Article, PDF)

2021

Mycobiomes of Young Beech Trees Are Distinguished by Organ Rather Than by Habitat, and Community Analyses Suggest Competitive Interactions Among Twig Fungi.
Siddique AB, Biella P, Unterseher M, Albrectsen BR.
Frontiers in Microbiology, 2021. Research Article (Peer Reviewed) (Article, PDF)

2020

Viruses of Endophytic and Pathogenic Forest Fungi.
Siddique AB.
Virus Genes, 2020. Review Article (Peer Reviewed) (Article, PDF)

2019

A Mycoparasitic and Opportunistic Fungus Is Inhabited by a Mycovirus.
Petrzik K, Siddique AB.
Archives of Virology, 2019. Research Article (Peer Reviewed) (Article, PDF)

2018

Mycobiomes of Sympatric Amorphophallus albispathus (Araceae) and Camellia sinensis (Theaceae) — A Case Study Reveals Clear Tissue Preferences and Differences in Diversity and Composition.
Unterseher M, Karunarathna SC, Cruz GR, Dagamac NH, Dahl MB, Siddique AB.
Mycological Progress, 2018. Research Article (Peer Reviewed) (Article, PDF)

Both Plant Genotype and Herbivory Shape Aspen Endophyte Communities.
Albrectsen BR, Siddique AB, Decker VHG, Unterseher M, Robinson KM.
Oecologia, 2018. Research Article (Peer Reviewed) (Article, PDF)

2017

What Do We Learn from Cultures in the Omics Age? High-Throughput Sequencing and Cultivation of Leaf-Inhabiting Endophytes from Beech (Fagus sylvatica L.) Revealed Complementary Community Composition but Similar Correlations with Local Habitat Conditions.
Siddique AB, Khokon AM, Unterseher M.
MycoKeys, 2017. Research Article (Peer Reviewed) (Article, PDF)

Local Habitat Conditions, Leaf Biochemistry and Seasonal Variations Drive Fungal Community Dynamics.
Siddique AB.
Ernst-Moritz-Arndt University, PhD Thesis, 2017 (Link)

2016

Diversity and Composition of the Leaf Mycobiome of Beech (Fagus sylvatica) Are Affected by Local Habitat Conditions and Leaf Biochemistry.
Unterseher M, Siddique AB, Brachmann A, Peršoh D.
PLOS ONE, 2016 (PDF)

A cost-effective and efficient strategy for Illumina sequencing of fungal communities: a case study of beech endophytes identified elevation as main explanatory factor.
Siddique AB, Unterseher M.
Fungal Ecology, 2016 (Article, PDF)

Corrigendum to “A cost-effective and efficient strategy for Illumina sequencing of fungal communities…”
Siddique AB, Unterseher M.
Fungal Ecology, 2016 (Article, PDF)